Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911948.1_cds_XP_016461925.1_55202
CDS Infomation

[gene=LOC107785199] [db_xref=GeneID:107785199] [protein=TBC1 domain family member 15-like isoform X2] [protein_id=XP_016461925.1] [location=complement(join(19970..19990,20384..20467,20643..20903,21108..21205,22312..22417,23192..23280,23847..23969,24194..24271,24525..24682,25400..25503,25718..25813,27080..27169))] [gbkey=CDS]
Sequence

ATGTGGAGGGACCCTGGTGCTCCTGCTGATTCTTTCTATCAGGTTCGCCCTGAATGTACA
GATGTTCCCAAAACTAGATTCAGAATCAAGGCTGGGAAAACCTTAAGTGCAAGGAAATGG
CATGCTGCATTTGCGTCAGAAGGTTATCTTGATATTGGCAAAACGCTAAGTCGAATTTAT
CGTGGGGGCATTCATCCATCAATTAGAGGTGAAGTTTGGGAATTTTTACTGGGTTGCTAT
GATCCAAAGAGCACATTTGAGGAACGAGAGAACATACTACAACGGCGGAGGGCCCAGTAT
GCTGTACTGAAAGAAGAATGCCGCATGATGTTTCCCATGATTGGAAGTGGTAGGTTCATT
ACTGCACCTGTAATTACTGAAGATGGTGACCCTATTCGAGATCCTATTACTCTCCAAGAG
GCACAAGCGGCAAAAGAATTAAGTTCAGGTGTTTCAGCTGGATATGAAATGGTAAAGGAG
CACGGCAAAAGAATAATCCAGTGGAAACTGTCATTACACCAGATAGGGCTCGATGTTGTT
CGGACTGACAGGACACTTGTCTTTTATGAGAAACAGGAGAATCTAGCCAAGCTTTGGGAT
ATTCTGTCTGTTTATGCTTGGTTTGACAAAGATGTTAATTATTGTCAAGGAATGAGCGAT
CTTTGCTCCCCCATGATTATTCTTCTAGATGATGAAGCCGATGCATTTTGGTGCTTTCAA
CGCCTTATGAAGAGACTGAGAGGAAATTTCAGATGCACCGAGAGGTCTGTTGGAGTAGAG
GTGCAGCTGAGTAATCTAGCTTCAGTAACGCAAGTTATTGATCCAAAACTTCATCGTCAC
TTAGAGACATTAGGTGGAGGTGATTACCTATTTGCTATCCGGATGCTCATTGTTTTGTTT
CGTCGAGAATTTTCTTTTGCTGATTCATTATATCTTTGGGAGATGATGTGGGCTTTGGAA
TATGATCCCGACCTTTTTCTTATGTATGAAGACCCTGACTTAGCAGCTGAAAAATCTGAA
GGATCTAAAGGAAAACCAAAATCGACACGCCAGTGTGGGAAATTTGAGAGAGAAAATATG
AAAAATGGAGGCAAAGGTGTTGAAGCTCCCCTCCCAATTTCCGTTTTCCTAGTAGCCAGT
GTCCTGAAAGACAAGAGCACGAAGTTGCTGACAGAAGCTAAAGGACTGGACGATGTTGTT
AAGATACTGAATGACATCACTGGAAACCTGGATGCCAAAAAGGCTTGCACCGGTGCAATG
AAACTTCACAAGAAATATCTTAAAAAGGCAGCCAATGCCAACAGGTAA

Peptide Sequence

PEP ID

XP_016461925.1
PEP Infomation

PREDICTED: TBC1 domain family member 15-like isoform X2 [Nicotiana tabacum]
Sequence

MWRDPGAPADSFYQVRPECTDVPKTRFRIKAGKTLSARKWHAAFASEGYLDIGKTLSRIY
RGGIHPSIRGEVWEFLLGCYDPKSTFEERENILQRRRAQYAVLKEECRMMFPMIGSGRFI
TAPVITEDGDPIRDPITLQEAQAAKELSSGVSAGYEMVKEHGKRIIQWKLSLHQIGLDVV
RTDRTLVFYEKQENLAKLWDILSVYAWFDKDVNYCQGMSDLCSPMIILLDDEADAFWCFQ
RLMKRLRGNFRCTERSVGVEVQLSNLASVTQVIDPKLHRHLETLGGGDYLFAIRMLIVLF
RREFSFADSLYLWEMMWALEYDPDLFLMYEDPDLAAEKSEGSKGKPKSTRQCGKFERENM
KNGGKGVEAPLPISVFLVASVLKDKSTKLLTEAKGLDDVVKILNDITGNLDAKKACTGAM
KLHKKYLKKAANANR

Transcript Sequence

Gene sequence data has not been registered.